fluorescent protein properties from fpbase — fpbase

A dataset containing some of the properties of all the 'basic' (single fluorescent state) fluorescent proteins in the fpbase database (downloaded 2021.10.02).

fpbase_data

Format

A data frame with 574 rows and 16 variables:

url: FPbase url
name: name
stokes: Stokes shift (nm)
slug: slug - lower case name used in url
ipg_id
agg: oligomerisation state
ex_max: wavelength of excitation peak (nm)
em_max: wavelength of emission peak (nm)
ext_coeff: excitation coefficient (EC, M-1cm-1)
qy: quantum yield
pka: pKa
brightness: brightness
bleach: rate of photobleaching/photostability (s)
maturation: maturation half time (min)
lifetime: fluorescence lifetime (ns)
cofactor: cofactor required for fluorescence (if any)

Source

https://www.fpbase.org/api/proteins/basic/?format=json